Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 32
Release date: Dec 8 2017
Last update date: Nov 7 2018
Access: Public
Computational protocol: TopHat, Cufflinks, Tuxedo, HISAT2, HTSeq, DESeq2
Dataset link Chromatin reprogramming in primordial germ cells requires Nanos-dependent down-regulation of the synMuvB transcription factor LIN-15B

Experimental Protocol


30 RNA-seq samples are inclued in this study. These include PGC transcriptomes from wild-type, nos-1(gv5)nos-2(RNAi), mes-2(RNAi), mes-4(RNAi), nos-1(gv5)nos-2(RNAi);lin15-B(RNAi) and biological replicates.

Repositories


GEO

GSE100652

ENA

SRP110754

BioProject

PRJNA392422

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Contact


Geraldine Seydoux

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