Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 6
Release date: Nov 19 2013
Last update date: Sep 28 2018
Access: Public
Genes: PPARG, CEBPA, MIR27A, MIR29A, MIR222
Taxon: Homo sapiens
Dataset link Integrated analysis of transcript level regulation of metabolism during human adipocyte differentiation [ChIP-Seq]

Experimental Protocol


Illumina Solexa sequencing: Six samples in total. Two ChIP-seq samples were prepared using an antibody against H3K4me3 active TSS chromatin marker from human SGBS preadipocyte and day 10 differentiated SGBS adipocyte cells. From day 10 differentiated SGBS cells additional three samples were prepared using an antibody against PPARg, CEBPa and LXRa to determine their genome-wide binding. One input control sample is included.

Repositories


GEO

GSE41629

ArrayExpress

E-GEOD-41629

ENA

SRP016497

BioProject

PRJNA177774

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