Computational protocol: The protein–DNA contacts in RutR·carAB operator complexes

Similar protocols

Protocol publication

[…] The Cα’s of the HTH motif (amino acid range 17–60, RutR numbering) of one monomer of each molecule were superimposed using the LSQ-superpose option in the program Wincoot (). was drawn using the software UCSF Chimera (). […]

Pipeline specifications

Software tools SuperPose, UCSF Chimera
Application Protein structure analysis
Organisms Escherichia coli
Chemicals Carbamyl Phosphate, Thymine, Uracil