Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 18
Release date: May 8 2008
Last update date: Mar 19 2012
Access: Public
Diseases: Neoplasms, Prostatic Neoplasms
Chemicals: Androgens, Tretinoin
Dataset link Candidate prostate cancer genes through comparative expression-profiling of seminal vesicle

Experimental Protocol


cDNA microarrays from the Stanford Functional Genomics Facility were used for expression profiling of 11 normal prostate and 7 seminal vesicle specimens (6 of which were matched pairs), against a universal RNA reference. Extracted expression ratios were normalized by array then mean centered by gene, and expression differences between normal prostate and seminal vesicle identified using Significance Analysis of Microarrays (SAM).

Repositories


GEO

GSE11376

ArrayExpress

E-GEOD-11376

BioProject

PRJNA106485

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Contact


Jonathan Pollack