Dataset features

Specifications


Application: Hi-C analysis
Number of samples: 6
Release date: Feb 10 2018
Last update date: Oct 18 2018
Access: Public
Diseases: Neoplasms
Dataset link Three-dimensional analysis of regulatory features reveals functional enhancer-associated loops

Experimental Protocol


We analyzed two datasets, TCC in MCF7 and PANC1 cells. We then correlated them with histone modification data and gene expression data. Anti-CTCF ChIP-Seq was performed on PANC1 cells.

Repositories


GEO

GSE68858

ENA

SRP058323

BioProject

PRJNA283913

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Contact


Seth Frietze