Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 12
Release date: Jan 20 2017
Last update date: Oct 24 2018
Access: Public
Genes: TP53
Taxon: Homo sapiens
Dataset link Spontaneous single-copy loss of TP53 in human embryonic stem cells markedly increases cell proliferation and survival [RNA-Seq]

Experimental Protocol


Triplicate cDNA libraries of two mutant WA09 lines with a single-copy deletion of chr17p13.1, and two wild-type WA09 lines, for a total of 12 libraries were sequenced using Illumina HiSeq 2500. The sequence reads were mapped to hg19 reference genome and hits that passed quality filters were analyzed for differential expression.

Repositories


GEO

GSE70874

ENA

SRP061037

BioProject

PRJNA289747

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Contact


Robert Morey