Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 12
Release date: Mar 8 2017
Last update date: Nov 29 2018
Access: Public
Diseases: Liver Neoplasms, Neoplasms, Pancreatic Neoplasms
Computational protocol: PrimeView, limma, STAR, Subread, edgeR, iRegulon, GSEA, GEO
Dataset link Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells (part of study on HepG2)

Experimental Protocol


Three conditions were investigated: (1) untreated HepG2 cells (= controls), (2) HepG2 cells treated with 2.5µM acriflavine, (3) HepG2 cells treated with 5µM acriflavine. For each condition four biological replicates were profiled.

Repositories


GEO

GSE82110

ENA

SRP075963

BioProject

PRJNA324072

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Contact


Wouter Van Delm
Rekin's Janky

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