Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 8
Release date: Jun 8 2015
Last update date: Nov 14 2017
Access: Public
Diseases: Breast Neoplasms
Dataset link Identification of several potential chromatin binding sites of HOXB7 and its downstream target genes in breast cancer

Experimental Protocol


Examination of chromatin binding sites of HOXB7 in BT-474 breast cancer cell line using ChIP-seq. Four parallel IgG samples were sequenced, merged together and used as a control data set. Two parallel HOXB7 ChIP samples were sequenced and merged for each replicate, AF1 and AF2. Both HOXB7 ChIP replicates (AF1 and AF2) contained approximately the same amount of reads as the merged IgG control data set.

Repositories


GEO

GSE47164

ArrayExpress

E-GEOD-47164

ENA

SRP022961

BioProject

PRJNA204940

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