Computational protocol: Comprehensive splicing graph analysis of alternative splicing patterns in chicken, compared to human and mouse

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Protocol publication

[…] GO Analysis was conducted by using data obtained from Ensembl using the BioMart [] tool. The text file consisting of Gene Ontologies for orthologous AS genes for chicken human and mouse genomes were reformatted and put through the WEGO [] tool to obtain the GO plot and the corresponding values for the molecular function, biological process and cellular component. […]

Pipeline specifications

Software tools BioMart, WEGO
Application Genome annotation
Organisms Mus musculus, Gallus gallus, Homo sapiens