Dataset features

Specifications


Application: Gene expression microarray analysis, ChIP-on-chip analysis
Number of samples: 5
Release date: Jan 1 2009
Last update date: Oct 29 2018
Access: Public
Diseases: Epstein-Barr Virus Infections
Dataset link Identifying Sites Bound by Epstein Barr Nuclear Antigen 1 (EBNA1) in the Human Genome

Experimental Protocol


We analysed mRNA expression from the EBV-positive lymphoblastoid cell line 721 transduced with either a control (empty) retroviral vector or a DomNeg1-encoding retroviral vector. For ChIP-chip, DNA from immunoprecipitated chromatin using a anti-EBNA1 antibody (IH4) along with total chromatin was hybridized to a Nimblegen human promoter arrays (CHAR0150-HP2). A single ChIP-chip experiment was performed with DNAs pooled equally from three independent ChIP experiments.

Repositories


GEO

GSE13315

ArrayExpress

E-GEOD-13315

BioProject

PRJNA109901

Download


Contact


Bill Sugden