Dataset features

Specifications


Application: aCGH data analysis
Number of samples: 49
Release date: Mar 24 2009
Last update date: Mar 20 2012
Access: Public
Diseases: Leiomyosarcoma, Lymphoma, Non-Hodgkin, Neoplasms
Dataset link Shared prognostic markers in undifferentiated pleomorphic sarcoma and leiomyosarcoma of the extremities

Experimental Protocol


Genomic DNA was extracted from a total of 49 samples, 31 Undifferentiated pleomorphic Sarcomas and 18 Leiomyosarcomas. The DNA was labeled using Bioprime array CGH labeling kit (Invitrogen). Promega pooled male DNA was used as reference. Labeled DNA was hybridized onto BAC arrays containing ~32 000 BAC clones printed in singlets. BAC arrays were produced at the SWEGENE DNA Microarray Facility at Lund University.

Repositories


GEO

GSE13775

ArrayExpress

E-GEOD-13775

BioProject

PRJNA110785

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