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Specifications


Application: RNA-seq analysis, sRNA-seq analysis
Number of samples: 5
Release date: Oct 4 2010
Last update date: Jan 5 2016
Access: Public
Taxon: Arabidopsis thaliana
Dataset link Genome-wide double-stranded RNA sequencing reveals the functional significance of base-paired RNAs in Arabidopsis

Experimental Protocol


Double-stranded (dsRNA) specific RNA sequencing (dsRNA-seq) in the unopened flowerbuds of wild-type col-0 plants and rdr6 mutant plants, including 2 samples of col-0 dsRNA (1X- or 2X- Ribominus-treated samples) and 1 sample of rdr6 dsRNA. Corresponding two smRNA libraries (smRNA-seq) of both wild-type col-0 plants and rdr6 mutant plants of the same tissue are also presented.

Repositories


GEO

GSE23439

ArrayExpress

E-GEOD-23439

ENA

SRP003413

BioProject

PRJNA131113

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Contact


Qi Zheng

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