Hi-C data analysis bioinformatics software tools

Hi-C analysis steps

Hi-C allows unbiased identification of chromatin interactions across an entire genome. Briefly: cells are crosslinked with formaldehyde; DNA is digested with a restriction enzyme that leaves a 5′-overhang; the 5′-overhang is filled, including a biotinylated residue;…

Hi-C data analysis bioinformatics software tools

G T A T C G C T A
HBP
Desktop

HBP Hi-C BED file analysis Pipeline

Integrates existing pipelines focusing on individual steps of Hi-C data…

Integrates existing pipelines focusing on individual steps of Hi-C data processing into an all-in-one package with adjustable parameters to infer the consensus 3D structure of genome from raw Hi-C…

Curators for Hi-C analysis

  • Nicolas Servant's avatar image
    Nicolas Servant
    Institut Curie, Paris, France ;…
  • Muhammad Shamim's avatar image Muhammad Shamim's country flag
    Muhammad Shamim
    Baylor College of Medicine

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