Dataset features

Specifications


Application: sRNA-seq analysis
Number of samples: 6
Release date: Dec 21 2016
Last update date: Oct 18 2018
Access: Public
Diseases: Hypoxia, Brain, Infection, Congenital, Hereditary, and Neonatal Diseases and Abnormalities, Sarcoma, Lymphoma, Primary Effusion
Dataset link KSHV Infection Mimics the Hypoxic Response Based on Next-Generation Sequencing [miRNA-Seq]

Experimental Protocol


6 samples analyzed. Two experimental conditions: hypoxic uninfected cells (SLK cells) and hypoxic chronically KSHV-infected cells (SLKK cells) (n=3). Two sequencing platforms: microRNA-Seq and mRNA-Seq. This hypoxia study was compared to a previously published normoxia study available on GEO (GSE62830).

Repositories


GEO

GSE79030

ENA

SRP071334

BioProject

PRJNA314773

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