Dataset features

Specifications


Application: RNA-seq analysis, sRNA-seq analysis
Number of samples: 22
Release date: Oct 15 2014
Last update date: Oct 2 2018
Access: Public
Diseases: Breast Neoplasms, Neoplasms
Chemicals: Estrogens
Genes: PIWIL1, ESR2, PIWIL2, PIWIL4
Dataset link RNA sequencing identifies specific PIWI-interacting small non-coding RNA expression patterns in breast cancer

Experimental Protocol


In addition, to understand the behavior of piRNAs with respect to miRNAs in breast tumor tissues, small RNA sequence data set available in Gene Expression Omnibus (GEO; GSM957192 TAX577740T ,GSM957194 TAX577740N, GSM957195 TAX577453T, GSM957197 TAX577453N, GSM957198 TAX577745T, GSM957200 TAX577745N, GSM957201 TAX577579T, GSM957203 TAX577579N) was used.

Repositories


GEO

GSE56134

ArrayExpress

E-GEOD-56134

ENA

SRP040505

BioProject

PRJNA242528

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Contact


Judith Staerk
Adnan Hashim