3Dec statistics

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3Dec specifications


Unique identifier OMICS_19458
Name 3Dec
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Programming languages C, C++
Computer skills Advanced
Version 0.0.3
Stability Stable
Maintained Yes



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  • person_outline Lei Li <>

Publication for 3Dec

3Dec in publication

PMCID: 5504792
PMID: 28697757
DOI: 10.1186/s12859-017-1743-4

[…] corresponding bases in the reference by “n”s before the second mapping (the first mapping is for variant calling). in addition, this proposal has been implemented in the updated training module of 3dec, which was published in the accompany paper []., we assessed the quality-scoring methods in several aspects. first, following ewing et al. [] and li et al. [], we assess the consistency of error […]

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3Dec institution(s)
National Center of Mathematics and Interdisciplinary Sciences, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Beijing, China
3Dec funding source(s)
Supported by the National Natural Science Foundation of China (Grant No. 91530105, 91130008, No. 11571349, and No.11201460), the Strategic Priority Research Program of the Chinese Academy of Sciences (Grant No. XDB13040600), the National Center for Mathematics and Interdisciplinary Sciences of the CAS, and the Key Laboratory of Systems and Control of the CAS; the Program of One hundred talented people, CAS; the Youth Innovation Promotion Association of the CAS.

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