3DNetMod specifications

Information


Unique identifier OMICS_26108
Name 3DNetMod
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data Some Hi-C interaction data.
Input format BED
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Jennifer Phillips-Cremins <>

Publication for 3DNetMod

3DNetMod institution(s)
Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA; Brain Behavior Laboratory, Department of Psychiatry, University of Pennsylvania, Philadelphia, PA, USA; Electrical and Systems Engineering, University of Pennsylvania, Philadelphia, PA, USA; Epigenetics Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
3DNetMod funding source(s)
Supported by The New York Stem Cell Foundation, the Alfred P. Sloan Foundation, the NIH Director’s New Innovator Award (1DP2MH11024701), a 4D Nucleome Common Fund grant (1U01HL12999801) and a joint NSF-NIGMS grant to support research at the interface of the biological and mathematical sciences (1562665).

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