Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 24
Release date: Jan 1 2012
Last update date: Apr 22 2013
Access: Public
Diseases: Muscular Diseases
Computational protocol: Codelink, IPA
Dataset link Gene expression analysis of hemizygous or heterozygous KIT exon 11 deletions NIH3T3 infected cells

Experimental Protocol


We have 6 samples per group: NIH3T3 MIGR (empty vector), NIH3T3 KIT wild-type (WT), NIH3T3 KIT del557-558 (D6), NIH3T3 KIT del564-581 (D54), NIH3T3 KIT WT/ KIT D6 and NIH3T3 KIT WT/KIT D54. All these samples were included in each of the 4 groups: culture medium without Stem Cell Factor (SCF-), culture medium with SCF (SCF+), culture medium with SCF and imatinib 1µM (STI 1µM), and culture medium with SCF and imatinib 5µM (STI 5µM). We analyzed each sample in one array.

Repositories


GEO

GSE33968

BioProject

PRJNA150521

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Contact


Séverine TABONE-EGLINGER

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