Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 62
Release date: Feb 5 2010
Last update date: Mar 21 2012
Access: Public
Chemicals: Cadmium, Chromium, Cobalt, Zinc
Dataset link Classifier analysis of gene expression profiles reveals a discriminatory gene set for soil containing different metals

Experimental Protocol


Gene expression was measured in springtails after exposure of 2 days to soil containing either EC10 or EC50 of 6 different metals. The exposure experiment was performed in two separate series (1 and 2), both containing a separate non-spiked (LUFA 2.2) soil control. Also, two field soil samples were tested. The samples were divided into a separate training set and a validation set for USC classifier analysis.

Repositories


GEO

GSE19353

ArrayExpress

E-GEOD-19353

BioProject

PRJNA120385

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Contact


Benjamin Nota