Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 6
Release date: Feb 1 2015
Last update date: Oct 24 2018
Access: Public
Diseases: Lymphoma, Primary Effusion
Genes: ORF57, BTG1, EGR1, ZFP36, TNFSF9
Dataset link HITS-CLIP analysis uncovers a link between the Kaposi's sarcoma associated herpesvirus ORF57 protein and host pre-mRNA metabolism

Experimental Protocol


HITS-CLIP was performed on TREx BCBL-Rta cells 20 hpi using antibodies against ORF57. Three biological replicates were performed.

Repositories


GEO

GSE64413

ArrayExpress

E-GEOD-64413

ENA

SRP051468

BioProject

PRJNA270976

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Contact


Yang Xie

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