Dataset features

Specifications


Application: RNA-seq analysis, sRNA-seq analysis
Number of samples: 3
Release date: Dec 1 2013
Last update date: Sep 28 2018
Access: Public
Diseases: Alphavirus Infections
Dataset link Detection of small RNAs generated during early infection of human HEK 293 cells by the alphavirus Sindbis virus

Experimental Protocol


RNA was isolated from mock infected and SINV inoculated HEK 293 cells at 4hpi and 6hpi cDNA libraries were generated for the small RNA (sRNA) content of the cells and sequenced using Illumina GA II, which yielded between 29.1M and 30.5M reads per sample

Repositories


GEO

GSE46254

ArrayExpress

E-GEOD-46254

ENA

SRP021459

BioProject

PRJNA198469

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Contact


Irina Mohorianu

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