Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 2
Release date: May 28 2015
Last update date: Aug 13 2018
Access: Public
Diseases: Leukemia, T-Cell
Computational protocol: Trimmomatic, TopHat, Subread, DESeq, Monocle, DAVID
Dataset link Transcriptome data from induced Pluripotent Stem cells

Experimental Protocol


human iPSc lines were derived from human dermal fibroblasts from control donors. SNP and gene expression datasets from control lines. Note that iPS NHDF-1, also used in the current study, has been published previously [Van Wilgenburg B., Browne C., Vowles J. & Cowley S. A. Efficient, long term production of monocyte-derived macrophages from human pluripotent stem cells under partly-defined and fully-defined conditions. PLoS One 8, e71098 (2013); Physiological characterisation of human iPS-derived dopaminergic neurons. Hartfield EM, Yamasaki-Mann M, Ribeiro Fernandes HJ, Vowles J, James WS, Cowley SA, Wade-Martins R. PLoS One. 2014 9(2):e87388]

Repositories


GEO

GSE69288

ArrayExpress

E-GEOD-69288

BioProject

PRJNA285110

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Contact


Sally Cowley
Sally A Cowley

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