Computational protocol: A Versatile Class of Cell Surface Directional Motors Gives Rise to Gliding Motility and Sporulation in Myxococcus xanthus

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Protocol publication

[…] Protein sequences were analyzed by BlastP (NCBI) searches of the nonredundant (nr) and Pfam (release 24.0) (see comment on ) databases . Signal peptides signal and transmembrane helices were the predicted using the signalP 3.0 and TMHMM v.2.0 servers, respectively. […]

Pipeline specifications

Software tools BLASTP, SignalP, TMHMM
Databases Pfam
Application Membrane protein analysis
Organisms Myxococcus xanthus