Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 417
Release date: Jan 31 2016
Last update date: Aug 1 2018
Access: Public
Computational protocol: BaseSpace, TopHat, Cufflinks, HTSeq, voom, limma, edgeR, DESeq, mclust, FlyBase
Dataset link Expression profiling individual DrosDel flies heterozygous for deletions of chromosome 2L in a hybrid background

Experimental Protocol


We performed RNA-Seq analysis of 417 single adult flies in duplicate or triplicate. Flies are from 73 different genotypes. Differential gene expression was analyzed separately for each sex, gene expression from each genotype was compared to normalized mean of gene expression remaining 72 genotypes.

Repositories


GEO

GSE73920

ENA

SRP064744

BioProject

PRJNA298537

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Contact


Brian Oliver

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