Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 912
Release date: Jul 27 2018
Last update date: Nov 30 2018
Access: Public
Diseases: Vipoma
Dataset link Hippocampal single-nucleus sequencing identifies a unique transcriptional signature that is predictive of reactivity in dentate granule neurons

Experimental Protocol


Single-nucleus RNA-seq of mouse hippocampal neurons after exposure to a novel experience or remaining in the home cage and stained for cell type-specific markers, NEUN, PROX1 and CTIP2 as well as the activity-dependent marker FOS. In addition, single-nucleus RNA-seq of mouse DG neurons after exposure to two separate contexts stained for cell type-specific markers, PROX1 and CTIP2, as well as two temporally distinct activity-dependent markers, FOS and ARC.

Repositories


GEO

GSE98679

ENA

SRP106662

BioProject

PRJNA385870

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Contact


Fred Gage