Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 8
Release date: Oct 1 2012
Last update date: May 23 2013
Access: Public
Computational protocol: TopHat, DESeq, baySeq, mclust, Clustal W, Jalview, PAUP*, TreeViewX
Dataset link Combining laser microdissection and RNA-seq to chart the transcriptional landscape of fungal development

Experimental Protocol


8 samples were sequenced (2 independent biological replicates for the four conditions "wt sex: SM2, SM7", "wt veg: SM1, SM6", "wt proto: SM4, SM5", "pro1 proto: SM8, SM9", each on one Illumina/Solexa lane (GAII or HiSeq, single reads of 36 or 100 bases))

Repositories


GEO

GSE33668

ArrayExpress

E-GEOD-33668

ENA

SRP009312

BioProject

PRJNA148727

Download


Contact


Minou Nowrousian

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