Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 16
Release date: Jan 5 2017
Last update date: Apr 6 2017
Access: Public
Chemicals: Carbon
Dataset link The molecular response of the white-rot fungus Dichomitus squalens to wood and non-woody biomass as examined by transcriptome and exoproteome analyses

Experimental Protocol


This study compares the gene expression of D. squalens growing on different plant biomass at two different time points. The culture medium was supplemented with spruce wood (Picea abies) sawdust, aspen wood (Populus tremula) sawdust, powdered wheat bran or powdered cotton seed hulls respectively. Samples were taken after 9 and 16 days of culture.

Repositories


GEO

GSE79674

ENA

SRP072498

BioProject

PRJNA316680

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Contact


Ronald de Vries