Computational protocol: Neuraminidase 1 (NEU1) promotes proliferation and migration as a diagnostic and prognostic biomarker of hepatocellular carcinoma

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Protocol publication

[…] Survival differences among groups were estimated using the R package “survival”, and the receiving operating character (ROC) curve were calculated and drawn with R package “ROCR” [].Gene expression differences between NEU1 highly and lowly expressed tumors were evaluated using student t-test, and false discovery rate (FDR) were calculated with bonferroni, and genes with FDR less than 0.01 were retained for further analysis. KEGG pathway enrichment analysis based on genes identified were analyzed with DAVID tools [] (The Database for Annotation, Visualization and Integrated Discovery v6.7). […]

Pipeline specifications

Software tools ROCR, DAVID
Databases KEGG PATHWAY
Application Miscellaneous
Organisms Homo sapiens
Diseases Carcinoma, Hepatocellular, Neoplasms