Dataset features

Specifications


Application: RNA-seq analysis, sRNA-seq analysis
Number of samples: 11
Release date: Jun 27 2016
Last update date: Aug 10 2018
Access: Public
Diseases: Bronchial Diseases, Carcinoma, Non-Small-Cell Lung, Lung Neoplasms
Dataset link mature piRNAs expression profile in human bronchial epithelial (HBE) and non-small cell lung cancer (NSCLC) cells

Experimental Protocol


To get the purified mature piRNAs, small RNA (<200nt) was separated from total RNAs firstly, and then piRNA were purified in one nucleotide resolution gel. A unique 6 nt barcode for every cell line to distinguish each reads from each specific cell line, and the right size of small RNAs were used library for Illumina sequencing.

Repositories


GEO

GSE57681

ArrayExpress

E-GEOD-57681

ENA

SRP041993

BioProject

PRJNA247674

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Contact


Priti Kumari

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