Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 16
Release date: Jan 1 2014
Last update date: Oct 18 2018
Access: Public
Diseases: Airway Obstruction
Computational protocol: UCSC Genome Browser, BaseSpace, FastQC, FASTX-Toolkit, TopHat, BamTools, Picard, Cufflinks, CummeRbund, DAVID, PLINK, liftoveR, OMIM, dbSNP
Dataset link Human Airway Smooth Muscle Transcriptome Changes in Response to Asthma Medications

Experimental Protocol


mRNA profiles obtained via RNA-Seq for four primary human airway smooth muscle cell lines that were treated with dexamethasone, albuterol, dexamethasone+albuterol or were left untreated.

Repositories


GEO

GSE52778

ArrayExpress

E-GEOD-52778

ENA

SRP033351

BioProject

PRJNA229998

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Contact


Blanca Himes

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