Dataset features

Specifications


Application: aCGH data analysis
Number of samples: 6
Release date: Dec 14 2010
Last update date: Mar 22 2012
Access: Public
Diseases: Williams Syndrome
Chemicals: Nucleotides
Dataset link The composition and origins of intravarietal genomic heterogeneity in soybean

Experimental Protocol


Soybean variety Williams 82 (Wm82) was derived from a Williams x Kingwa BC6F3 population. CGH was performed to detect regions of Kingwa genomic introgression in Wm82; Williams was hybridized as a common reference against Kingwa and four different Wm82 individuals. Two different Wm82 individuals (SGC and ISU) were also hybridized with one another. The soybean tiling array consists of 700k probes, spaced at approximately 1.1 kb intervals.

Repositories


GEO

GSE25294

ArrayExpress

E-GEOD-25294

BioProject

PRJNA134895

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Contact


Robert Stupar
Robert M Stupar