Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 38
Release date: Apr 11 2018
Last update date: Nov 29 2018
Access: Public
Genes: N
Taxon: Drosophila melanogaster, Homo sapiens, Mus musculus
Dataset link TAF-ChIP: An ultra low input approach for genome wide chromatin immunoprecipitation assay

Experimental Protocol


ChIP Seq datasets from sorted Neural stem cells (NSCs) from Drosophila larval brain and sorted K562 cells. To benchmark the TAF-ChIP dataset, previously published datasets from ENCODE consortium and CUT&RUN (Nature Protocols volume 13, pages 1006?1019 (2018)) was donwloaded and processed identically as the TAF-ChIP datasets.

Repositories


GEO

GSE112633

ENA

SRP137008

BioProject

PRJNA448587

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Contact


Junaid Akhtar