|Dataset type:||Expression profiling by high throughput sequencing|
|Number of samples:||15|
|Release date:||Jan 28 2019|
|Last update date:||Feb 19 2019|
|Dataset link||Transcriptome profiling of caspase-2 deficient lymphomas from EμMyc and neuroblastomas from Th-MycN mice|
We used tumors from EμMyc/Casp2-/- mice (which are more aggressive compared to their EμMyc counterarts) as well as tumors from Th-MycN/Casp2-/- mice (which show delayed tumour onset compared to Th-MycN mice) and compared the transcriptomes to their Casp2 wild type counterpart tumors. Sequencing was carried out with Illumina HiSeq 2000 and used short, single-end reads (1x 50bp flow cells) with 4 samples per lane. This yielded approximately 20-30 million raw reads per sample.