Computational protocol: Quantitative map of multiple auditory cortical regions with a stereotaxic fine scale atlas of the mouse brain

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Protocol publication

[…] Auditory regions were delineated on Nissl-stained coronal template slices, along the vertical gridlines shown in , at 0.2-mm intervals between 2.0 mm and 4.0 mm posterior to the bregma. The template slices were prepared from a 7-wk-old mouse. The size of the template was adjusted to the average size of three mice. Regional boundaries were drawn perpendicularly to the cortical surface, so that the boundary lines penetrate ventral and dorsal points marked according to the coordinate information shown in . Regions were colored from the cortical surface to the edge between layer VI and the white matter. The drawings and images were prepared using CellSense (Olympus), CorelDRAW (Corel, Tokyo, Japan), Adobe Illustrator (Adobe Systems, San Jose, CA), and Adobe Photoshop (Adobe Systems) software. […]

Pipeline specifications

Software tools CorelDraw, Adobe Illustrator
Application Miscellaneous
Organisms Mus musculus
Diseases Eye Diseases