Dataset features

Specifications


Application: Hi-C analysis
Number of samples: 2
Release date: May 22 2018
Last update date: Nov 21 2018
Access: Public
Genes: MDFIC, ANKS4B, CAST
Dataset link Allele-specific control of replication timing and genome organization during development [Promoter Capture Hi-C]

Experimental Protocol


We characterized the allelic differences in RT (Repli-seq), genome organization (Hi-C and promoter-capture Hi-C), gene expression (total nuclear RNA-seq) and chromatin accessibility (ATAC-seq) in distinct cell types from F1 hybrid musculus X castaneus mouse crosses.

Repositories


GEO

GSE114746

ENA

SRP148638

BioProject

PRJNA472462

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