Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 56
Release date: Mar 13 2017
Last update date: Nov 20 2018
Access: Public
Dataset link The pioneer factor OCT4 requires the chromatin remodeller BRG1 to support gene regulatory element function in mouse embryonic stem cells [ChIP-Seq]

Experimental Protocol


ZHBTC4 and Brg1fl/fl mouse embryonic stem cells were used to ablate OCT4 and BRG1 expression respectively, followed by ATAC-seq, ChIP-seq or RNA-seq to examine their contribution towards chromatin accessibility, transcription factor occupancy, and gene expression.

Repositories


GEO

GSE87820

ENA

SRP091443

BioProject

PRJNA347885

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