Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 28
Release date: Mar 16 2013
Last update date: Jun 17 2013
Access: Public
Chemicals: Ampicillin, Bacitracin, Cephalothin, Glucose
Dataset link Enterococcus faecalis OG1RF control vs. treatment with ampicillin, bacitracin, or cephalothin

Experimental Protocol


RNA was extracted from four replicate samples of each condition of interest (control cells grown to OD600 = 0.3 in FMC medium supplemented with 10mM glucose, then treated with ampicillin, bacitracin, or cephalothin for 30 or 60 minutes) and labeled with Cy3. For each replicate, labeled RNA was hybridized to slides along with Cy5-labeled reference RNA, extracted from E. faecalis OG1RF cells grown in BHI medium to mid-log.

Repositories


GEO

GSE45231

ArrayExpress

E-GEOD-45231

BioProject

PRJNA193278

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Contact


Jessica Kajfasz
Jessica K Kajfasz

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