Dataset features

Specifications


Application: BS-seq analysis
Number of samples: 8
Release date: Nov 5 2013
Last update date: Jul 26 2018
Access: Public
Genes: APOBEC2
Taxon: Mus musculus, Danio rerio
Dataset link Genome-scale DNA methylation maps of Zebrafish Muller glia during retina regeneration

Experimental Protocol


Reduced representation bisulfite sequencing (MspI,~40-220bp size fraction) of zebrafish MG before and after injury. This dataset includes 4 replicated samples: The MG samples report the genomic methylation of a quiescent state. The 4dpi MGPC sampes report the methylation of a dedifferentiated, proliferating progenitor. The 2dpi morpholino samples report the genomic methylation of a dedifferentiated MGPC following a conrtol or Apobec2a,2b knockdown.

Repositories


GEO

GSE50717

ArrayExpress

E-GEOD-50717

ENA

SRP029737

BioProject

PRJNA218577

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Contact


Ana Grant
Ana Rodrigues Grant