Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 9
Release date: Jul 18 2016
Last update date: Oct 19 2016
Access: Public
Chemicals: Oxygen
Dataset link Localizing gene regulation by RNA-seq reveals a staggered wood decay mechanism for the brown rot fungus Postia placenta

Experimental Protocol


We sequenced mRNA from 9 Postia placenta samples taken from 3 wood sections of wafer design, with 3 bioreplicates for each wood section, to compare the gene expression during brown rot processes. Three wood sections of the wafer are representing early to late decay stages.

Repositories


GEO

GSE84529

ArrayExpress

E-GEOD-84529

ENA

SRP078846

BioProject

PRJNA329543

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Contact


Jonathan Schilling