Dataset features

Specifications


Application: BS-seq analysis
Number of samples: 2
Release date: Nov 7 2014
Last update date: Dec 7 2016
Access: Public
Chemicals: Anthocyanins
Dataset link Methylation Affects Transposition and Splicing of a Large CACTA Transposable Element From a MYB Transcription Factor Regulating Anthocyanin Synthase (ANS) Genes in Soybean Seed Coats (Bisulfite-Seq)

Experimental Protocol


The genomic DNAs extracted from shoot tips of two seed color soybean lines, RM55-rm (black/brown striped) and RM30-R* (black) were sequenced in an Illumina HiSeq 2000 following the the Bisulfite (BS) sequencing method.

Repositories


GEO

GSE61116

ENA

SRP046241

BioProject

PRJNA260283

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Contact


Lila Vodkin

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