Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 16
Release date: Jan 26 2015
Last update date: Jan 27 2015
Access: Public
Dataset link Ecotoxicogenomics: interlaboratory comparability of microarray data [LabD_WB]

Experimental Protocol


First dataset: RNA extracts (Ex) derived from whole bodies of 8 controls and 8 cyfluthrin-exposed amphipods were prepared by one single lab and analyzed (i.e., labeling, microarray hybridization and feature extraction) by all 6 laboratories. Second dataset: Each of the 6 labs received 8 control and 8 cyfluthrin-exposed whole body samples (WB) for RNA extraction and microarrays. Lab C was unable to analyze the WB samples and only submitted data for the Ex samples.

Repositories


GEO

GSE64208

ArrayExpress

E-GEOD-64208

BioProject

PRJNA270516

Download