Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 3
Release date: Sep 23 2013
Last update date: Jun 21 2017
Access: Public
Diseases: Pneumonia, Aspiration
Computational protocol: TopHat, Bowtie, Cufflinks
Dataset link H2AZ extended acidic patch is necessary for formation specialized chromatin states in ESCs [ChIP-Seq]

Experimental Protocol


H2AZ extended acidic patch was mutated, or H2AZ was KD in mouse embryonic stem cells and RNA-Seq analysis was performed on the resulting cultures. Characterization of H2AZ-WT and -AP3-mutant binding specificities were performed by ChIP-Seq.

Repositories


GEO

GSE40063

ArrayExpress

E-GEOD-40063

ENA

SRP014793

BioProject

PRJNA172650

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Contact


Laurie Boyer
Laurie A Boyer

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