|Dataset type:||Expression profiling by high throughput sequencing, Genome binding/occupancy profiling by high throughput sequencing|
|Number of samples:||22|
|Release date:||Feb 16 2019|
|Last update date:||Feb 19 2019|
|Dataset link||Allele-specific expression profiling of imprinted genes in mouse isogenic pluripotent tissues and cell lines|
We include RNA-Seq on conventional B6D2F1 ESCs derived from fertilized embryos, three ESC lines derived from nuclear transfer embryos generated using B6D2F1 mouse embryonic fibroblast (MEF) donor nuclei (ESC-NT1) or B6D2F1 cumulus donor nuclei (ESC-NT2 and ESC-NT3), as well as three ESC lines derived from PGA embryos generated using B6D2F1 oocytes (ESC-PGA). Also included is RNA-Seq of three fertilized B6D2F1 EpiSC lines, three EpiSC lines derived from nuclear transfer embryos generated using a B6D2F1 cumulus donor nuclei (EpiSC-NT) and two EpiSC-PGA lines. For fertilized ESCs, ESC-NTs and ESC-PGAs we include 1 replica each of H3K4me3 and H3K27me3 ChIP-Seq epigenetic profiling.