Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 32
Release date: Feb 17 2018
Last update date: Feb 18 2018
Access: Public
Chemicals: Iron
Genes: RHO, CASR
Dataset link Iron acquisition system and cell shape of host bacteria commonly respond to the carriage of three plasmids belonging to different incompatibility groups.

Experimental Protocol


Transcriptome analysis was performed using Pseudomonas putida KT2440 harboring one of the three plasmid (RP4, pCAR1, NAH7), respectively. RNA maps of the donor or the plasmid-free strain were used as controls. Biologically duplicated data were obtained.

Repositories


GEO

GSE110733

BioProject

PRJNA434437

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Contact


Hideaki Nojiri