Dataset features

Specifications


Dataset type: Expression profiling by RT-PCR, Transcriptome or Gene expression
Number of samples: 8
Release date: Jun 8 2011
Last update date: Mar 23 2012
Access: Public
Taxon: Francisella tularensis, Homo sapiens
Dataset link qRT-PCR on Francisella tularensis LVS and ShuS4 strain during macrophage infection

Experimental Protocol


The study was a timecourse with 2 strains :LVS and Schu S4 and 4 time points: 0hours, 2hours, 4hours and 8hours. Samples were interrogated using high throughput qRT-PCR using 1,067 primer pairs designed from both strains. 0hours timepoints were done in duplicates, other time points in quadruplicates. Replicates were averages and then quantile normalized for each strain.

Repositories


GEO

GSE29755

BioProject

PRJNA140967

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Contact


John Braisted