Dataset features

Specifications


Application: SNP array data analysis, aCGH data analysis
Number of samples: 437
Release date: Oct 24 2014
Last update date: May 23 2017
Access: Public
Diseases: Down Syndrome, Heart Defects, Congenital
Computational protocol: PLINK, LocusZoom
Dataset link Affymetrix SNP 6.0 data for individuals with Trisomy 21 or Down syndrome

Experimental Protocol


Copy Number Variation Analysis of individuals with DS using Affymetrix SNP 6.0 genotyping platform. A composite reference was generated using the same dataset to derive the log2 ratios using Affymetrix Power Tols (APT). Submitting here the preliminary data from 437 subjects, 15 were excluded due to privacy concerns.

Repositories


GEO

GSE60607

ArrayExpress

E-GEOD-60607

BioProject

PRJNA259223

Download


Contact


Michael Zwick
Michael Edward Zwick

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