Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 12
Release date: Oct 31 2016
Last update date: May 11 2017
Access: Public
Diseases: Neoplasms
Genes: RB1, E2F1, tSox17beta
Dataset link A commonly inactivated tumor suppressor silences endogenous retroelements in somatic cells [Affymetrix expression]

Experimental Protocol


Total RNA was extracted from wild-type and mutant MEFs following 72h of serum deprivation. Expression levels were determined using the Affymetrix GeneChip Mouse Gene 1.0ST Array followed by analysis using Partek genomics suite to generate RMA values.

Repositories


GEO

GSE85638

BioProject

PRJNA338976

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Contact


Fred Dick