Dataset features

Specifications


Application: sRNA-seq analysis
Number of samples: 11
Release date: Mar 17 2016
Last update date: Apr 2 2016
Access: Public
Chemicals: Nucleotides
Dataset link Phytophthora infestans Ago1 binds miRNA and sRNAs from effector genes and transposable elements (small RNA-Seq)

Experimental Protocol


The number of small RNA samples sequenced from each Argonaute immunoprecipitation were: PiAgo1-IP, three; PiAgo3-IP, one; PiAgo4-IP, two; PiAgo5-IP, one. Control GFP immunoprecipitation: GFP-IP, two. Control input Ago1: two. Total number of samples: eleven.

Repositories


GEO

GSE74370

ENA

SRP065283

BioProject

PRJNA299833

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Contact


Anna Åsman
Anna Åsman