Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 24
Release date: Sep 20 2018
Last update date: Nov 20 2018
Access: Public
Taxon: Homo sapiens
Dataset link Internally Calibrated ChIP-seq (ICeChIP-seq) using a large panel of antibodies against H3K4 methylations to measure genome-wide histone modification density in mammalian cells

Experimental Protocol


Semi-synthetic nucleosome standards are spiked into ChIP experiments to conduct internally calibrated ChIP-seq (ICeChIP-seq) with 17 anti-H3K4 methylation antibodies of varying specificities in K562 cells and one anti-H3K4me1 antibody in WT and dCD MLL3/4 R1 mESC cells.

Repositories


GEO

GSE103543

ENA

SRP116896

BioProject

PRJNA401866

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Contact


Rohan Shah