Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 10
Release date: Apr 1 2012
Last update date: Apr 1 2012
Access: Public
Dataset link Combining transcriptomics with functional phylogenomics elucidates the ecophysiology of sulfatases in marine bacteria

Experimental Protocol


Dual channel microarrays have been used for comparing the gene expression of R. baltica SH1T under reference condition (grown on glucose) and grown on sulfated polysaccharides as substrates of interest. Substrates tested have been: Chondroitin sulfate, lambda carrageenan and fucoidan. Control: 3 Biological replicates, Substrates tested: 2-3 Biological replicates, 2-3 replicates per array

Repositories


GEO

GSE35832

ArrayExpress

E-GEOD-35832

BioProject

PRJNA151899

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Contact


Carl-Eric Wegner